The personality of a dog is flexible and indeterminate. Dogs can be exuberant or shy; friendly or hostile; fearful or bold; aggressive or passive or some combination of the above. These differences in personality may to some extent be determined by breed, or individual genetics, but for the most part it is based on how and to what extent each particular dog has been socialized.
Is there such a thing as the perfect puppy? In all likelihood there is not. There is always something one might change in any dog (or person really), but the goal should be to always strive towards raising a puppy to be its most perfect self. This is hard work, to be sure, but it is not only possible, it is necessary.
If you’re not directly familiar with clicker training, you might be a little confused on what exactly this style of training is all about. It is a newer style (although has been known and used for many decades) of training in the sense that it took a while for dog trainers to really hook onto it.